[1] | E. Wimmer, S. Mueller, TM. Tumpey, JK. Taubenberger, 2009, Synthetic viruses: a new opportunity to understand and preven viral disease. Nat Biotechnol., 27(12), 1163–1172. |
[2] | D. Verreault, S. Moineau, C. Duchaine, 2008, Methods for sampling of airborne viruses, Microbiology and Molecular Biology Reviews, vol.72 (3), 413–444. |
[3] | S. Katen, A. Zlotnick, 2009, The thermodynamics of virus capsid assembly, Methods Enzymol., 455. |
[4] | L. Collier, A. Balows, M. Sussman, 1998, Topley & Wilson's Microbiology and Microbial Infections, ninth ed., vol.1, Virology. |
[5] | R.D. Cadena-Nava, Y. Hu, R. F. Garmann, B. Ng, A. N. Zelikin, C. M. Knobler, W. M. Gelbart, 2011, Exploiting fluorescent polymers to probe the self-assembly of virus-like particles, J. Phys. Chem. B, 115 (10), 2386–2391, DOI: 10.1021/jp1094118. |
[6] | DL. Caspar, A. Klug, 1962, Physical principles in the construction of regular viruses. Cold Spring Harb. Symp. Quant. Biol, 27: 1–24. PMID 14019094. |
[7] | Mannige Ranjan V., Brooks Charles L. III., 2010, Periodic table of virus capsids: implications for natural selection and design, PloS ONE 5(3): e9423, doi:10.1371/journal.pone.0009423. |
[8] | J.E. Johnson, J.A. Speir, 2009, Desk Encyclopedia of General Virology, Boston, Academic Press, 115–123. |
[9] | The origin of icosahedral symmetry in viruses, The virus research group at UCLA Chem, Available: http://virus.chem.ucla.edu/icosahedral_symmetry. |
[10] | Ranjan V. Mannige, Charles L. Brooks, 2010, Supporting information to: Periodic table of virus capsids: implications for natural selection and design, Available: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0009423#s4. |
[11] | VIPERdb database [Online], Available: http://viperdb.scripps.edu/. |
[12] | R. Tellier, 2009, Aerosol transmission of influenza A virus: a review of new studies, J. R. Soc. Interface, 6, S783–S790, doi:10.1098/rsif.2009.0302 |
[13] | P. Fabian, J.J. McDevitt, W.H. DeHaan, R.O. Fung, B.J. Cowling, K.H. Chan, G.M. Leung, D.K. Milton, 2008, Influenza virus in human exhaled breath: an observational study, PLoS ONE3, e2691, doi:10.1371/journal. pone.0002691. |
[14] | D. Verreault, S. Moineau, C. Duchaine, 2008, Methods for sampling of airborne viruses, Microbiology and Molecular Biology Reviews, vol. 72 (3), 413–444. |
[15] | M. Mostafavi, A. Tadjeddine, Ch. Humbert, P. Kervalishvili, T. Bzhalava, V. Kvintradze, M. Tsirekidze, G. Kakabadze, T. Berberashvili, 2015, Studying physical characteristics of nano-bio-materials for sensory applications, Proc., Int. conf. on Advanced Materials and Technologies, Tbilisi, Georgia, 188-192. |
[16] | R.K. Chang, A.J. Campillo, 1996, Optical processes in microcavities, Advanced Series in Applied Physics v.3., World Sci. Publ. Co. Pte. Ltd. |
[17] | H.C. Ren, F. Vollmer, S. Arnold, A. Libchaber, 2007, High-Q microsphere biosensor-analysis for adsorption of rodlike bacteria, Optics Express, vol. 5 (25), 17410-17423. |
[18] | C.F. Bohren, D.R. Huffman, 1983, Absorption and Scattering of Light by Small Particles, John Wiley & Sons, Inc., 530. |
[19] | P.J. Wyatt, 1964, Scattering of electromagnetic plane waves from inhomogeneous spherically symmetric objects. Phys. Rev. vol. 134, AB1. |
[20] | D. Deirmendjian, 1969, Electromagnetic Scattering on Spherical Polydispersions, American EI Sevier Pub. C., Inc., New York, M., МIR, 1971 (in Russian). |
[21] | A. Ishimaru, 1981, Wave Propagation and Scattering in Random Media, M., MIR, 280 (in Russian). |
[22] | G. Mie, 1908, Beiträge zur Optik trüber Medien, speziell kolloidaler Metallösungen, Ann. d. Physik 25, 377–445. |
[23] | R.B. Vaganov, B.Z. Katsenelenbaum, 1982, The Basis of the Theory of Diffraction, М., Nauka (in Russian), 272. |
[24] | M. Born, E. Wolf, 1964, Principles of Optics, Electromagnetic Theory of Propagation, Interference and Diffraction of light, Pergamon Press. |
[25] | V.K. Khanna. 2012, Nanosensors: Physical, Chemical, and Biological. Series in sensors. CRC Press, A Taylor & Francis, LLC, 665. |
[26] | P.K. Jain, K.S. Lee, I.H. El-Sayed, M.A. El-Sayed, 2006, Calculated absorption and scattering properties of gold nanoparticles of different size, shape, and composition: applications in biological imaging and biomedicine. J. Phys. Chem. B,110 (14), 7238–7248, DOI: 10.1021/jp057170o. |
[27] | B.T. Draine, P.J. Flatau, 1994, J. Opt. Soc. Am. A, 11, 1491. |
[28] | I. Ermolina, H. Morgan, N.G. Green, J.J. Milner, Yu. Feldman, 2003, Dielectric spectroscopy of Tobacco Mosaic virus, Biochimicaet Biophysica Acta 1622, 57–63, doi:10.1016/S0304-4165(03)00118-1. |
[29] | I. Teraoka, S. Arnold, F. Vollmer, 2003, Perturbation approach to resonance shifts of whispering-gallery modes in a dielectric microsphere as a probe of a surrounding medium, J. Opt. Soc. Am. B, vol. 20 (9), 1937-1946. |
[30] | Fundamentals and Applications in Aerosol Spectroscopy. 2011, ed. by Ruth Signorell, Jonathan P. Reid. CRC Press, by Taylor & Francis Group, LLC, 509. |
[31] | F. Vollmer, S. Arnold, 2008, Whispering-gallery-mode biosensing: label-free detection down to single molecules, Nature Methods, vol. 5(7), 591-596. |
[32] | KT. Tsen, Shaw-Wei D. Tsen, Chih-Long Chang, Chien-Fu Hung, TC. Wu, J.G. Kiang, 2007, Inactivation of viruses by coherent excitations with a low power visible femtosecond laser, Virology Journal, 4:50, doi: 10.1186/1743-422X-4-50. |
[33] | E.C. Dykeman, 2008, Atomistic normal mode analysis of large biomolecular systems: theory and applications, A Dissert. pres. in part. fulfill. of the require. for the Degree Doc. of Philos., Arizona State University. |
[34] | KT. Tsen, E.C. Dykeman, O.F. Sankey, N.T. Lin, S.W.D. Tsen, J.G. Kiang, 2006, Observation of the low frequency vibrational modes of bacteriophage M13 in water by Raman spectroscopy, Virology Journal, 3:79,doi:10.1186/1743-422X-3-79, Available: http://www.virologyj.com/content/3/1/79. |
[35] | E.C. Dykeman, O.F. Sankey, 2008, Low frequency mechanical modes of viral capsids: an atomistic approach, Phys. Rev. Lett., PRL 100, 028101, doi: 10.1103/PhysRevLett.100.028101. |
[36] | E.C. Dykeman, O.F. Sankey, 2010, Atomistic modeling of the low-frequency mechanical modes and Raman spectra of icosahedral virus capsids, Phys. Rev. E. Stat. Nonlin. Soft Matter Phys., 81(2): 021918. |
[37] | S.W.D. Tsen, D.H. Kingsley, C. Poweleit, S. Achilefu, D.S. Soroka, T.C. Wu, K.T. Tsen, 2014, Studies of inactivation mechanism of non-enveloped icosahedral virus by a visible ultrashort pulsed laser, Virology Journal, 11:20, Available http://www.virologyj.com/content/11/1/20. |
[38] | K.T. Tsen, S.W.D. Tsen, O.F. Sankey, 2007, Selective inactivation of micro-organisms with near-infrared femtosecond laser pulses, J. Phys., Condens. Matter, 19, 472201, doi:10.1088/0953-8984/19/47/472201. |
[39] | W.T. Herman, van Vlijmen, Symmetry in normal mode analysis of icosahedral viruses, Theory and applications to biological and chemical systems, Chapman & Hall, CRC Mathematical and Computational Biology Series. Ed. by Q. Cui, I. Bahar, Taylor & Francis Group., Ch. 11, [Online]. |
[40] | M.M. Tirion, 1905, Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis Phys. Rev. Lett. 77, (publ. 1996). |
[41] | F. Tama, F.X. Gadea, O. Marques, Y. H. Sanejouand, 2000, Building-block approach for determining low-frequency normal modes of macromolecules, Proteins, Struct., Funct., Genet. 41, 1. |
[42] | H.W. T. van Vlijmen, M. Karplus, 2001, Normal mode analysis of large systems with icosahedral symmetry: Application to (Dialanine) (60) in full and reduced basis set implementations, J. Chem. Phys. 115, 691-698. |
[43] | C. Boehm, DNA Pathogen Frequencies, A Look At the Frequencies of Rife-related Plasma Emission Devices, Available: http://www.dnafrequencies.com/. |
[44] | T.N. Bzhalava, 1991, Diffraction of electromagnetic waves on the cylinders with radially varying permittivity, The U.S.S.R. scient. tech. conf. on Theory and Application of Millimetric Electromagnetic Wave Band (EHF), (in Russian), Tbilisi, Georgia, 24-25. |
[45] | A.L. Aden, M. Kerker, 1951, Scattering of electromagnetic waves from two concentric spheres. J. Appl. Phys., 22, 1242-1246. |
[46] | C. Humbert, B. Busson, 2011, Biointerface characterization by advanced IR spectroscopy, ELSevier, Ch.10, Sum- frequency generation spectroscopy of biointerfaces, 279–321, Available: http://www.sciencedirect.com/science/article/pii/B9780444535580000102. |
[47] | M. Mostafavi, A. Tadjeddine, C. Humbert, P. Kervalishvili, T. Bzhalava, T. Berberashvili, 2015, Nonlinear optical spectroscopy of nano-bio-materials”, San-Diego State University Conference. |
[48] | M. Mostafavi, A. Tadjeddine, C. Humbert, P. Kervalishvili, T. Bzhalava, V. Kvintradze, T. Berberashvili, 2015, Optical spectroscopy of nanobioobjects for sensory application, The 33rd ISTC-KOREA Workshop, NanoCon-2015, CIS-KOREA Technology Cooperation Opportunities In Nanotechnology Field, Euras Tech Corp., Seoul, 157-165. |